Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548m in CCC Ovarian Hendrix Cluster 44 Table contains all genes in the CCC Ovarian Hendrix cluster number 44. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548m 55450 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:24190] zzz999 1643 DDB2 damage-specific DNA binding protein 2, 48kDa [Source:HGNC Symbol;Acc:2718] zzz999 2968 GTF2H4 general transcription factor IIH, polypeptide 4, 52kDa [Source:HGNC Symbol;Acc:4658] zzz999 2957 GTF2A1 general transcription factor IIA, 1, 19/37kDa [Source:HGNC Symbol;Acc:4646] zzz999 221656 KDM1B lysine (K)-specific demethylase 1B [Source:HGNC Symbol;Acc:21577] T 382 ARF6 ADP-ribosylation factor 6 [Source:HGNC Symbol;Acc:659] zzz999 2178 FANCE Fanconi anemia, complementation group E [Source:HGNC Symbol;Acc:3586] zzz999 6605 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] zzz999 10957 PNRC1 proline-rich nuclear receptor coactivator 1 [Source:HGNC Symbol;Acc:17278] zzz999 9044 BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Source:HGNC Symbol;Acc:17307] zzz999 10576 CCT2 chaperonin containing TCP1, subunit 2 (beta) [Source:HGNC Symbol;Acc:1615] zzz999 54778 RNF111 ring finger protein 111 [Source:HGNC Symbol;Acc:17384] T 3099 HK2 hexokinase 2 [Source:HGNC Symbol;Acc:4923] zzz999 5987 TRIM27 tripartite motif containing 27 [Source:HGNC Symbol;Acc:9975] zzz999 10667 FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:21062] zzz999 4723 NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa [Source:HGNC Symbol;Acc:7716] zzz999 10146 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 [Source:HGNC Symbol;Acc:30292] T 8899 PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) [Source:HGNC Symbol;Acc:17346] P T 57573 ZNF471 zinc finger protein 471 [Source:HGNC Symbol;Acc:23226] zzz999 9784 SNX17 sorting nexin 17 [Source:HGNC Symbol;Acc:14979] T 23062 GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2 [Source:HGNC Symbol;Acc:16064] T 7143 TNR tenascin R (restrictin, janusin) [Source:HGNC Symbol;Acc:11953] zzz999 10153 CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta [Source:HGNC Symbol;Acc:24218] zzz999 55156 ARMC1 armadillo repeat containing 1 [Source:HGNC Symbol;Acc:17684] zzz999 637 BID BH3 interacting domain death agonist [Source:HGNC Symbol;Acc:1050] zzz999 55334 SLC39A9 solute carrier family 39 (zinc transporter), member 9 [Source:HGNC Symbol;Acc:20182] T 1965 EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265] T 7518 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:HGNC Symbol;Acc:12831] zzz999 51455 REV1 REV1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14060] zzz999 7637 ZNF84 Zinc finger protein 84 [Source:UniProtKB/Swiss-Prot;Acc:P51523] zzz999 6502 SKP2 S-phase kinase-associated protein 2 (p45) [Source:HGNC Symbol;Acc:10901] zzz999 5876 RABGGTB Rab geranylgeranyltransferase, beta subunit [Source:HGNC Symbol;Acc:9796] T 4841 NONO non-POU domain containing, octamer-binding [Source:HGNC Symbol;Acc:7871] zzz999 3298 HSF2 heat shock transcription factor 2 [Source:HGNC Symbol;Acc:5225] zzz999 83448 PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like [Source:HGNC Symbol;Acc:25276] T 10049 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 [Source:HGNC Symbol;Acc:14888] zzz999 51399 TRAPPC4 trafficking protein particle complex 4 [Source:HGNC Symbol;Acc:19943] zzz999 2309 FOXO3 forkhead box O3 [Source:HGNC Symbol;Acc:3821] T 5962 RDX radixin [Source:HGNC Symbol;Acc:9944] zzz999 8726 EED embryonic ectoderm development [Source:HGNC Symbol;Acc:3188] zzz999 54541 DDIT4 DNA-damage-inducible transcript 4 [Source:HGNC Symbol;Acc:24944] zzz999 6809 STX3 syntaxin 3 [Source:HGNC Symbol;Acc:11438] T 7225 TRPC6 transient receptor potential cation channel, subfamily C, member 6 [Source:HGNC Symbol;Acc:12338] T 97 ACYP1 acylphosphatase 1, erythrocyte (common) type [Source:HGNC Symbol;Acc:179] zzz999 92342 METTL18 methyltransferase like 18 [Source:HGNC Symbol;Acc:28793] zzz999 26007 DAK dihydroxyacetone kinase 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24552] zzz999 4237 MFAP2 microfibrillar-associated protein 2 [Source:HGNC Symbol;Acc:7033] T 7398 USP1 ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:12607] zzz999 7112 TMPO thymopoietin [Source:HGNC Symbol;Acc:11875] T 1174 AP1S1 adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559] zzz999 55353 LAPTM4B lysosomal protein transmembrane 4 beta [Source:HGNC Symbol;Acc:13646] zzz999 9060 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:8604] T 51444 RNF138 ring finger protein 138 [Source:HGNC Symbol;Acc:17765] zzz999 26084 ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 [Source:HGNC Symbol;Acc:24490] T 57099 AVEN apoptosis, caspase activation inhibitor [Source:HGNC Symbol;Acc:13509] zzz999 57804 POLD4 polymerase (DNA-directed), delta 4 [Source:HGNC Symbol;Acc:14106] zzz999 10771 ZMYND11 zinc finger, MYND-type containing 11 [Source:HGNC Symbol;Acc:16966] P T 570 BAAT bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase) [Source:HGNC Symbol;Acc:932] zzz999 1806 DPYD dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:3012] P T 3185 HNRNPF heterogeneous nuclear ribonucleoprotein F [Source:HGNC Symbol;Acc:5039] zzz999 65084 TMEM135 transmembrane protein 135 [Source:HGNC Symbol;Acc:26167] T 51773 RSF1 remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:18118] zzz999 8431 NR0B2 nuclear receptor subfamily 0, group B, member 2 [Source:HGNC Symbol;Acc:7961] zzz999 262 AMD1 adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:457] T 22938 SNW1 SNW domain containing 1 [Source:HGNC Symbol;Acc:16696] zzz999 2289 FKBP5 FK506 binding protein 5 [Source:HGNC Symbol;Acc:3721] T 9785 DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:HGNC Symbol;Acc:17211] zzz999 905 CCNT2 cyclin T2 [Source:HGNC Symbol;Acc:1600] P T 5970 RELA v-rel reticuloendotheliosis viral oncogene homolog A (avian) [Source:HGNC Symbol;Acc:9955] zzz999 79692 ZNF322A zinc finger protein 322A [Source:HGNC Symbol;Acc:23640] T 4846 NOS3 nitric oxide synthase 3 (endothelial cell) [Source:HGNC Symbol;Acc:7876] zzz999 9828 ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 [Source:HGNC Symbol;Acc:21726] zzz999 10209 EIF1 eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] zzz999 9653 HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5193] P T 57048 PLSCR3 phospholipid scramblase 3 [Source:HGNC Symbol;Acc:16495] zzz999 6472 SHMT2 serine hydroxymethyltransferase 2 (mitochondrial) [Source:HGNC Symbol;Acc:10852] zzz999 203068 TUBB tubulin, beta [Source:HGNC Symbol;Acc:20778] zzz999 52 ACP1 acid phosphatase 1, soluble [Source:HGNC Symbol;Acc:122] zzz999 8496 PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:HGNC Symbol;Acc:9249] T 5605 MAP2K2 mitogen-activated protein kinase kinase 2 [Source:HGNC Symbol;Acc:6842] zzz999 5021 OXTR oxytocin receptor [Source:HGNC Symbol;Acc:8529] T 4673 NAP1L1 nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637] T 5902 RANBP1 RAN binding protein 1 [Source:HGNC Symbol;Acc:9847] zzz999 55234 SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:HGNC Symbol;Acc:18247] T 51380 CSAD cysteine sulfinic acid decarboxylase [Source:HGNC Symbol;Acc:18966] zzz999 1207 CLNS1A chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080] T 51366 UBR5 ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:16806] zzz999 10845 CLPX ClpX caseinolytic peptidase X homolog (E. coli) [Source:HGNC Symbol;Acc:2088] zzz999 4074 M6PR mannose-6-phosphate receptor (cation dependent) [Source:HGNC Symbol;Acc:6752] zzz999 25800 SLC39A6 solute carrier family 39 (zinc transporter), member 6 [Source:HGNC Symbol;Acc:18607] zzz999 55818 KDM3A lysine (K)-specific demethylase 3A [Source:HGNC Symbol;Acc:20815] zzz999 1653 DDX1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Source:HGNC Symbol;Acc:2734] zzz999 8706 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [Source:HGNC Symbol;Acc:918] zzz999 3840 KPNA4 karyopherin alpha 4 (importin alpha 3) [Source:HGNC Symbol;Acc:6397] T 4436 MSH2 mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Source:HGNC Symbol;Acc:7325] zzz999 2060 EPS15 epidermal growth factor receptor pathway substrate 15 [Source:HGNC Symbol;Acc:3419] P T 6158 RPL28 ribosomal protein L28 [Source:HGNC Symbol;Acc:10330] zzz999 3998 LMAN1 lectin, mannose-binding, 1 [Source:HGNC Symbol;Acc:6631] zzz999 6147 RPL23A ribosomal protein L23a [Source:HGNC Symbol;Acc:10317] zzz999

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